Joint with: Computational Advances in Drug Discovery
AI in Molecular Biology
Sep 15–18, 2025 | Eldorado Hotel & Spa, Santa Fe, NM, United States
Scientific Organizers:
David R. Kelley and Jean Fan
In Person
On Demand
Sep 15–18, 2025 | Eldorado Hotel & Spa, Santa Fe, NM, United States
Scientific Organizers:
David R. Kelley and Jean Fan
Available Formats:
Supported by the Directors' Fund
In Person
On Demand
Available Formats: = In Person = On Demand
Monday, September 15, 2025
Fundraising
Booking Function
Merchandise Options
Registration Options
Registration
4:00–8:00 PM
Welcome Mixer
6:00–8:00 PM
Tuesday, September 16, 2025
Breakfast
7:00–8:00 AM
Poster Setup
7:30–8:00 AM
Poster Viewing
7:30–5:00 PM
Welcome and Keynote Address
8:00–9:00 AM
Barbara Engelhardt, Stanford University School of Medicine and Gladstone Institutes
Talk Title to be Announced
Talk Title to be Announced
Extracting Interpretable Insights from Biological AI
9:00–11:15 AM
Maria Brbic, EPFL
Talk Title to be Announced
Talk Title to be Announced
Hanna Wallach †, Microsoft Research
Talk Title to be Announced
Talk Title to be Announced
Jian Ma, Carnegie Mellon University
Learning Multiscale Cellular Organization and Interactions
Learning Multiscale Cellular Organization and Interactions
Dmitry Kobak, Tübingen University
Self-Supervised and Unsupervised Learning for 2D Visualization of Scientific Datasets
Self-Supervised and Unsupervised Learning for 2D Visualization of Scientific Datasets
Short Talk(s) Chosen from Abstracts
Coffee Break
9:30–9:50 AM
Lunch
11:15–12:15 PM
Posters
12:00–2:30 PM
Symposia Spotlight 1: Late-breaking research presentations selected from abstract submissions
2:30–4:30 PM
Short Talk(s) Chosen from Abstracts
Coffee Available
4:30–5:00 PM
Parsing and Annotating the Noncoding Genome
5:00–7:00 PM
David R. Kelley, Calico Life Sciences
Predicting Gene Expression from DNA Sequence
Predicting Gene Expression from DNA Sequence
Stein Aerts, Katholieke Universiteit Leuven
Single-Cell Multiomic Inference of Gene Regulatory Networks
Single-Cell Multiomic Inference of Gene Regulatory Networks
Christina S. Leslie, Memorial Sloan-Kettering Cancer Center
Machine Learning for Single Cell and Regulatory Genomics in Cancer
Machine Learning for Single Cell and Regulatory Genomics in Cancer
Short Talk(s) Chosen from Abstracts
On Own for Dinner
7:00–8:00 PM
Wednesday, September 17, 2025
Breakfast
7:00–8:00 AM
Mapping Cellular Interactions in Tissues with Spatial Imaging and Genomics
8:00–11:00 AM
Jean Fan, Johns Hopkins University
Machine Learning for Spatial Omics Data Integration
Machine Learning for Spatial Omics Data Integration
Mingyao Li, University of Pennsylvania School of Medicine
Unlocking the Power of Spatial Omics with AI
Unlocking the Power of Spatial Omics with AI
Faisal Mahmood, Brigham and Women's Hospital
Talk Title to be Announced
Talk Title to be Announced
Jinmiao Chen †, Singapore Immunology Network-SIgN
Talk Title to be Announced
Talk Title to be Announced
Short Talk(s) Chosen from Abstracts
Coffee Break
9:00–9:20 AM
Poster Setup
11:00–1:00 PM
On Own for Lunch
11:00–1:30 PM
Poster Viewing
1:00–10:00 PM
Career Roundtable (Joint)
1:30–2:30 PM
Panel Discussion: Challenges and Opportunities for Innovation and Responsibility in AI-Driven Biology with Academic and Industry Leaders
2:45–4:30 PM
* Jean Fan, Johns Hopkins University
Coffee Available
4:30–5:00 PM
Learning a Language of Cellular Morphology from Imaging
5:00–7:00 PM
David Van Valen, Caltech
Cell Segmentation Foundation Models
Cell Segmentation Foundation Models
Speaker to be Announced
Berton Earnshaw, Recursion Pharmaceuticals
Masked Autoencoders for Microscopy are Scalable Learners of Cellular Biology
Masked Autoencoders for Microscopy are Scalable Learners of Cellular Biology
Short Talk(s) Chosen from Abstracts
Social Hour with Lite Bites
7:00–8:00 PM
Posters
7:30–10:00 PM
Thursday, September 18, 2025
Breakfast
7:00–8:00 AM
Toward an Integration of AI and Systems Biology
8:00–11:00 AM
Jacob Kimmel, NewLimit
Learning the Combinatorial Code of Epigenetic Reprogramming
Learning the Combinatorial Code of Epigenetic Reprogramming
Hector Garcia Martin, Lawrence Berkeley National Laboratory
Bioengineering Cells to Produce Biofuels and Renewable Biomaterials
Bioengineering Cells to Produce Biofuels and Renewable Biomaterials
Caroline Uhler †, Massachusetts Institute of Technology
Talk Title to be Announced
Talk Title to be Announced
Short Talk(s) Chosen from Abstracts
Coffee Break
9:00–9:20 AM
On Own for Lunch
11:00–2:30 PM
Symposia Spotlight 2: Late-breaking research presentations selected from abstract submissions
2:30–4:30 PM
Short Talk(s) Chosen from Abstracts
Coffee Available
4:30–5:00 PM
Analyzing and Harnessing Proteins
5:00–7:00 PM
Mona Singh, Princeton University
Talk Title to be Announced
Talk Title to be Announced
Ava Amini, Microsoft Research
Talk Title to be Announced
Talk Title to be Announced
Short Talk(s) Chosen from Abstracts
Closing Keynote Address
6:30–7:15 PM
David Baker, University of Washington
Protein Design using Deep Learning
Protein Design using Deep Learning
Meeting Wrap-Up: Outcomes and Future Directions (Organizers)
7:15–7:30 PM
Social Hour with Lite Bites
7:30–8:30 PM
Entertainment
8:00–11:00 PM
Cash Bar
8:00–11:00 PM
Friday, September 19, 2025
Departure
12:00–11:59 PM
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