Joint with: Imaging Biomolecules Across Scales: From Atoms to Tissues
Machine Learning Applied to Macromolecular Structure and Function

March 23-26, 2025 | Keystone Resort, Keystone, CO, United States
Scientific Organizers: Mohammed AlQuraishi, Elizabeth Kellogg and Possu Huang

  In Person
  On Demand

March 23-26, 2025 | Keystone Resort, Keystone, CO, United States
Scientific Organizers: Mohammed AlQuraishi, Elizabeth Kellogg and Possu Huang

Available Formats:   = In Person     = On Demand
Sunday, March 23, 2025
Registration
4:00–8:00 PM
Welcome Mixer
6:00–8:00 PM
Monday, March 24, 2025
Breakfast
7:00–8:00 AM
Welcome and Keynote Address (Joint)
8:00–9:00 AM
Wolfgang P. Baumeister, Max Planck Institute of Biochemistry
Cryo-Electron Tomography or the Power of Seeing the Whole Picture
Machine Learning for Protein Structure (Joint)
9:00–11:15 AM
Hannah Wayment-Steele, Brandeis University
Have Protein Language Models Learned Dynamics
Sergey Ovchinnikov, Massachusetts Institute of Technology
Hacking AlphaFold to Do New Things
Mohammed AlQuraishi, Columbia University
Understanding How AlphaFold Learns
Short Talk(s) Chosen from Abstracts
Coffee Break
9:30–9:50 AM
On Own for Lunch
11:15–5:00 PM
Poster Setup
11:15–1:00 PM
Poster Viewing
1:00–10:00 PM
Workshop: Getting into Machine Learning
2:30–4:30 PM
Short Talk(s) Chosen from Abstracts
Coffee Available
4:30–5:00 PM
Applying Protein Structure Prediction at Scale
5:00–7:00 PM
Martin Steinegger, Seoul National University
Fast Search Methods to Organize the Structural Protein Universe
Florian Jug, Human Technopole
Talk Title to be Announced
Arne Elofsson, Stockholm University
AlphaFold Applied to Modeling Protein-Protein Interactions
Short Talk(s) Chosen from Abstracts
Social Hour with Lite Bites
7:00–8:00 PM
Posters
7:30–10:00 PM
Tuesday, March 25, 2025
Breakfast
7:00–8:00 AM
CryoET/EM and Machine Learning (Joint)
8:00–11:00 AM
Bridget Carragher, Chan Zuckerberg Imaging Institute
Making Cryo-ET Faster, Better, Cheaper
Bronwyn Lucas, University of California, Berkeley
Single Molecule Localization and Structure Probing in Cells
Elizabeth Villa, University of California, San Diego
Discovering New Biology with Cryo-ET
Elizabeth Kellogg, St. Jude Children's Research Hospital
Structural Insights into CRISPR-Based Genome Editing
Short Talk(s) Chosen from Abstracts
Coffee Break
9:00–9:20 AM
On Own for Lunch
11:00–5:00 PM
Poster Setup
11:00–1:00 PM
Poster Viewing
1:00–10:00 PM
Career Roundtable (Joint)
3:00–4:30 PM
Coffee Available
4:30–5:00 PM
Protein Structure and Drug Discovery
5:00–7:00 PM
John Chodera †, Memorial Sloan Kettering Cancer Center
Talk Title to be Announced
Stefan Geschwindner, AstraZeneca
Structural Biophysics in Drug Discovery
Jack Nicoludis, Genentech, Inc.
Protein Structure Prediction for Drug Discovery
Short Talk(s) Chosen from Abstracts
Social Hour with Lite Bites
7:00–8:00 PM
Posters
7:30–10:00 PM
Wednesday, March 26, 2025
Breakfast
7:00–8:00 AM
Machine Learning for Protein Design
8:00–11:00 AM
Amy E. Keating, Massachusetts Institute of Technology
ML Design of Protein-Binding Peptides
John Ingraham, Generate Biomedicines, Inc.
Diffusion Models for Controllable Protein Design
Possu Huang, Stanford University
Deep Generative Models for Protein Design
Bruno Emanuel Correia, École Polytechnique Fédérale de Lausanne
Talk Title to be Announced
Short Talk(s) Chosen from Abstracts
Coffee Break
9:00–9:20 AM
On Own for Lunch
11:00–5:00 PM
Coffee Available
4:30–5:00 PM
Machine Learning Methods Proximal to Protein Structure
5:00–6:45 PM
Speaker to be Announced
Talk Title to be Announced
Charlotte Deane, Exscientia and University of Oxford
Structural Basis of Small Molecule Binding by Machine Learning
Ellen Zhong, Princeton University.
Machine Learning for CryoEM Reconstruction
Short Talk(s) Chosen from Abstracts
Meeting Wrap-Up: Outcomes and Future Directions (Organizers)
6:45–7:00 PM
Social Hour with Lite Bites
7:00–8:00 PM
Entertainment
8:00–11:00 PM
Cash Bar
8:00–11:00 PM
Thursday, March 27, 2025
Departure
12:00–11:59 PM

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