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Multi-Protein Complexes Involved in Cell Regulation (E6)

Organizer(s): Tom L. Blundell, Carol V. Robinson and Ralph A. Bradshaw
August 18 - 23, 2006
St. John's College - Cambridge  ·  University of Cambridge, Cambridge
Abstract Deadline: May 9, 2006
Late Abstract Deadline: May 26, 2006
Scholarship Deadline: April 18, 2006
Early Registration Deadline: June 19, 2006


Supported by The Director's Fund



This meeting took place in the 2006 season.

For a complete list of the meetings for the upcoming/current season,
see our meeting list, or search for a meeting.
Summary of Meeting
As knowledge of protein structure advances it has become increasingly clear that protein interactions, both transient and stable, are far more extensive than originally appreciated and that the resulting complexes, with a very wide range of stabilities, form highly coordinated networks that govern biological processes. Understanding the fluxes of information that are transmitted by these protein-protein contacts is the essence of systems biology and is dependent, at least to a first approximation, on determining the structures of the proteins involved. There have been multiple approaches to this challenging problem ranging from crystallography and 2D NMR to hybridization and mass spectrometry. This meeting will assess the state of determining the structural and functional bases for protein-protein interactions with the view of exploring how these approaches augment and extend each other.

Friday, August 18
3:00 - 7:30 PM Registration Foyer
6:30 - 7:30 PM Refreshments Foyer
7:30 - 9:30 PM Keynote Session Palmerston
Tom L. Blundell, University of Cambridge
Multiprotein Assemblies: Structural Biology and Drug Discovery
Carol V. Robinson, University of Cambridge
Multi-Protein Complexes – New Insights from Old Tools
Saturday, August 19
7:30 - 8:30 AM Breakfast Buttery
8:30 - 11:30 AM Technological Approaches: Studying Macromolecular Interactions and Dynamics I Palmerston
* Wolfgang P. Baumeister, Max Planck Institute of Biochemistry
Mapping Molecular Landscapes inside Cells by Cryoelectron Tomography
Keiichi Namba, Osaka University
Molecular Mechanisms of Swimming and Tumbling in Bacterial Motility
F. Ulrich Hartl, Max Planck Institut
Protein Folding Machines: Interactions between Chaperones and their Clients
James A. Wells, University of California, San Francisco
Discovering Inhibitors of Protein Complexes
9:40 - 10:00 AM Coffee Break Foyer
11:30 AM - 12:30 PM Lunch The Hall
11:30 AM - 12:00 PM Poster Setup Castlereagh Room/Foyer
12:30 - 2:30 PM Poster Session 1 Castlereagh Room/Foyer
2:30 - 4:30 PM Workshop 1: Dynamics and Regulation of Protein-Protein Interactions Palmerston
* Nicholas J. Harmer,
* Marko Hyvönen, University of Cambridge
Ludovic Bannwarth, Centre National de la Recherche Scientifique, University Paris 6
Disabling a Protein Dimer with Rationally Designed Interface Peptidomimetics
Nadia Milech, University of Western Australia
Anti-Apoptotic Phylomer Peptides: Disruptors from Protein Folds
Alexis Gautreau, Centre National de la Recherche Scientifique, Institut Curie
Structural Conversion of Brick1 from a Free Trimer to a Single Subunit during the Assembly of the Wave Complex
Eric S. Underbakke, University of Wisconsin, Madison
Illuminating Protein-Protein Interactions in Signal Transduction: Footprinting a Reconstituted Escherichia coli Chemotaxis Signaling Lattice
Angela Manegold Svendsen, Hagedorn Research Institute
Kinetics of Insulin-Like Peptide 3 (INSL3) Binding to the Leucine-Rich Repeat-Containing G-Protein-Coupled Receptor 8 (LGR8): Evidence for Negative Cooperativity
Roopa Thapar, Hauptman-Woodward Institute
Allosteric Regulation of the SLBP-Histone mRNA Complex by Phosphorylation-Dependent Proline Isomerization
4:30 - 5:00 PM Coffee Available Foyer
5:00 - 7:00 PM Technological Approaches: Studying Macromolecular Interactions and Dynamics II Palmerston
* Christopher M. Dobson, University of Cambridge
Alexander Grishaev, National Institutes of Health
Combining Solution NMR and Small Angle Scattering for Macromolecular Structure Determination
Laura S. Itzhaki, Hutchison/MRC Research Centre
Analysis of the assembly and dynamics of the multi-subunit ubiquitin ligase SCFSkp2
Elizabeth A. Komives, University of California, San Diego
Dynamics of the NF-kappaB - IkappaB Interaction
Sunday, August 20
7:30 - 8:30 AM Breakfast Buttery
8:30 - 11:30 AM Cell Surface Receptors Palmerston
* John E. Ladbury, University College London
Protein assemblies dictate specificity in tyrosine kinase-mediated signal transduction
Colin W. Ward, University of New South Wales
Structural Insights into Signaling by the EGF and Insulin Receptor Families
Nicholas J. Harmer,
Signaling Clusters in the Fibroblast Growth Factor System
Johanna Mari Ivaska, University of Turku
Integrating Matrix Messages and Motility
9:40 - 10:00 AM Coffee Break Foyer
11:30 - 12:30 PM Lunch The Hall
4:30 - 5:00 PM Coffee Available Foyer
5:00 - 7:00 PM Signaling Pathways Palmerston
* Peter J. Parker, Cancer Research UK
Multiple signalling pathways regulate the assembly of a PKCepsilon complex
Yosef Yarden, Weizmann Institute of Science
Oncogenic growth factor signaling: a system perspective
Bertrand Séraphin, Universite Paris 6
Structural and Functional Analysis of Protein Complexes Involved in Pathways Controlling Gene Expression
Monday, August 21
7:30 - 8:30 AM Breakfast Buttery
8:30 - 11:30 AM Intracellular Signaling – Structural Aspects Palmerston
* Louise N. Johnson, University of Oxford
Why Do Mammalian Cells Need More Than One Cyclin?
John Kuriyan, University of California, Berkeley
Structural Insights Into the Regulation of Tyrosine Kinase Signaling
David Barford, Institute of Cancer Research
Function and Structure of the Anaphase Promoting Complex, a Multi-Subunit Ubiquitin Ligase
Stephen W. Fesik, Abbott Laboratories
Apoptosis: Structural Biology and Drug Design
9:40 - 10:00 AM Coffee Break Foyer
11:30 AM - 12:30 PM Lunch The Hall
11:30 AM - 12:00 PM Poster Setup Castlereagh Room/Foyer
12:30 - 2:30 PM Poster Session 2 Castlereagh Room/Foyer
2:30 - 4:30 PM Workshop 2: Diverse Methods for the Study of Protein-Protein Interactions Palmerston
* Jane Clarke, University of Cambridge
Ananth Krupa, London Research Institute, Cancer Research UK
Substrate Recognition by CDKs: Role of Consensus Sequence Motifs and Implications for Identification of Novel Substrates
Yingnan Zhang, Genentech, Inc.
Genome-Wide Analysis of the PDZ Domain Family
Jacqui M. Matthews, University of Sydney
The Assembly Of A Transcriptional Complex
Ricardo M. Biondi, University of Saarland
Modulation of Phosphorylation-Dependent Protein Kinase Conformational Transitions with Low Molecular Weight Compounds
Narayanaswamy Srinivasan, Indian Institute of Science
Interaction Interfaces of Protein Domains are not Topologically Equivalent Across Families within Superfamilies: Evolutionary Dynamics and Implications for Metabolic and Signalling Pathways
Carla F. Cervantes, University of California, San Diego
Dynamics of IkappaBalpha Probed by NMR
Franca Fraternali, King's College London
Molecular Dynamics Study of Hydration Properties of Prion Proteins
Lan Huang, University of California, Irvine
Proteomic Analysis of Human 26S Proteasome Complex Using Mass Spectrometry
4:30 - 5:00 PM Coffee Available Foyer
5:00 - 7:00 PM Cellular Processes Palmerston
* Dale B. Wigley, Cancer Research UK, Clare Hall Laboratories
Crystal Structure of RecBCD: A Machine for Processing DNA Breaks
Andrej Sali, University of California, San Francisco
Modeling the Structures of Proteins and Macromolecular Assemblies
Marko Hyvönen, University of Cambridge
Extracellular Regulation of TGFbeta Family Growth Factors
Tuesday, August 22
7:30 - 8:30 AM Breakfast Buttery
8:30 - 11:30 AM Computational Analyses: Docking and Protein-Protein Interactions Palmerston
* Janet M. Thornton, European Bioinformatics Institute
Structure to Function: Recognising Interaction Partners
Robert B. Russell, EMBL-Heidelberg
Predicting Molecular Details for Protein-Interaction Networks
Joël Janin, CNRS/Université Paris-Sud
Protein-protein recognition sites: structural analysis and prediction
Juan Fernandez-Recio, Institute of Biomedical Research (IRB-PCB)
Computational Protein-Protein Docking: Present and Future Challenges
9:40 - 10:00 AM Coffee Break Foyer
11:30 AM - 12:30 PM Lunch The Hall
4:30 - 5:00 PM Coffee Available Foyer
5:00 - 7:00 PM Protein Folding, Aggregation and Diseases Palmerston
* Christopher M. Dobson, University of Cambridge
Protein Folding , Molecular Evolution and Human Disease
David Eisenberg, University of California, Los Angeles
Structures of Febryl-Forming Segments from Amyloid Proteins
Sheena E. Radford, University of Leeds
Life on a knife edge: Tipping the balance between folding and aggregation
7:00 - 8:00 PM Dinner The Hall
8:00 - 11:00 PM Entertainment The Hall
Wednesday, August 23
Departure
*Session Chair   †Speaker invited, not yet responded.




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